☰ Navigation Tabs
Crystal structure of the Olfactomedin domain of latrophilin 3 in P65 crystal form
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 Microbach under-oil 9 293 15-25 % PEG 8000, 50-300 mM MgCl2, 100 mM TAPS pH 9.0, Microbach under-oil, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.88 34.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 85.066 α = 90 b = 85.066 β = 90 c = 66.083 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm 2014-06-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X4C 0.98 NSLS X4C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.606 40 99.1 68854 35190
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.61 1.65 96.6
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION Native-SAD 1.606 36.835 1.34 69711 68854 3923 98.77 0.1665 0.1665 0.1651 0.1663 0.1904 0.1917 Random
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.319 f_angle_d 1.127 f_chiral_restr 0.049 f_bond_d 0.007 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2084 Nucleic Acid Atoms Solvent Atoms 133 Heterogen Atoms 1
Software Software Software Name Purpose PHASER phasing PHENIX refinement MAR345 data collection XDS data reduction SCALA data scaling