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The structure a AS-48 G13K/L40K mutant
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1O82
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.6 295 0.2 M ammonium acetate, 30% PEG4K, 0.1M sodium citrate tribasic dihydrate plus ANAPOE-58, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.33 47.16
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 32.82 α = 90 b = 49.91 β = 98.16 c = 41.72 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-4 ESRF ID14-4
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.2 24.9 100 41746 41746 1 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.2 1.22 99.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1O82 1.2 24.1 2 39619 39619 2103 99.96 0.11969 0.11819 0.1326 0.14704 0.1587 RANDOM 12.541
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.22 -0.34 -0.16 0.04
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 51.32 r_dihedral_angle_2_deg 36.665 r_dihedral_angle_4_deg 20.613 r_dihedral_angle_3_deg 14.074 r_rigid_bond_restr 13.955 r_sphericity_bonded 11.401 r_long_range_B_refined 6.004 r_dihedral_angle_1_deg 5.279 r_scangle_other 5.16 r_long_range_B_other 5.134
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 51.32 r_dihedral_angle_2_deg 36.665 r_dihedral_angle_4_deg 20.613 r_dihedral_angle_3_deg 14.074 r_rigid_bond_restr 13.955 r_sphericity_bonded 11.401 r_long_range_B_refined 6.004 r_dihedral_angle_1_deg 5.279 r_scangle_other 5.16 r_long_range_B_other 5.134 r_scbond_it 4.649 r_scbond_other 4.645 r_angle_other_deg 3.466 r_angle_refined_deg 2.039 r_mcangle_other 1.202 r_mcangle_it 1.201 r_mcbond_other 0.998 r_mcbond_it 0.993 r_chiral_restr 0.132 r_gen_planes_other 0.022 r_bond_refined_d 0.021 r_gen_planes_refined 0.01 r_bond_other_d
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1020 Nucleic Acid Atoms Solvent Atoms 305 Heterogen Atoms 13
Software Software Software Name Purpose DNA data collection PHASER phasing REFMAC refinement MOSFLM data reduction SCALA data scaling