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Crystal structure of computational designed leucine rich repeats DLRR_G3 in space group F222
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.5 298 2 M ammonium sulfate, 0.1 M Bis-Tris, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.62 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.134 α = 90 b = 136.384 β = 90 c = 161.753 γ = 90
Symmetry Space Group F 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 70 mirrors 2014-01-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.49 30 96.2 0.067 0.153 4.5 17735 17061 1 23.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.49 2.59 84.5 0.153 4.1 1.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (I) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.53 23.5 1 15856 869 98.1 0.18475 0.18129 0.188 0.24646 0.2476 RANDOM 29.872
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.3 0.85 0.45
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.823 r_dihedral_angle_4_deg 21.73 r_dihedral_angle_3_deg 17.367 r_dihedral_angle_1_deg 5.959 r_long_range_B_refined 3.708 r_long_range_B_other 3.669 r_scangle_other 1.641 r_angle_refined_deg 1.629 r_mcangle_it 1.198 r_mcangle_other 1.198
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 44.823 r_dihedral_angle_4_deg 21.73 r_dihedral_angle_3_deg 17.367 r_dihedral_angle_1_deg 5.959 r_long_range_B_refined 3.708 r_long_range_B_other 3.669 r_scangle_other 1.641 r_angle_refined_deg 1.629 r_mcangle_it 1.198 r_mcangle_other 1.198 r_scbond_it 1.037 r_scbond_other 1.035 r_angle_other_deg 0.859 r_mcbond_it 0.687 r_mcbond_other 0.681 r_chiral_restr 0.084 r_bond_refined_d 0.014 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3367 Nucleic Acid Atoms Solvent Atoms 91 Heterogen Atoms 29
Software Software Software Name Purpose CrystalClear data collection PHASER phasing REFMAC refinement HKL-2000 data reduction HKL-2000 data scaling