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CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4O62 pdb entry 4o62
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 293 20% PEG-3350, 0.2 M ammonium chloride, vapor diffusion, sitting drop, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.02 39.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.622 α = 90 b = 64.86 β = 90 c = 36.015 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2014-06-21 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.9791521 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.75 45.05 100 0.123 12.5 6.9 15427
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.75 1.78 99.9 0.958 2.3 7.1 838
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT pdb entry 4o62 1.75 45.05 15390 928 99.94 0.1828 0.1804 0.1918 0.2229 0.2278 THIN SHELLS (SFTOOLS) 28.654
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.92 1.95 -1.03
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.818 r_dihedral_angle_4_deg 18.941 r_dihedral_angle_3_deg 11.994 r_dihedral_angle_1_deg 7.795 r_mcangle_it 5.667 r_mcbond_it 3.669 r_mcbond_other 3.665 r_angle_refined_deg 1.603 r_angle_other_deg 0.814 r_chiral_restr 0.099
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 40.818 r_dihedral_angle_4_deg 18.941 r_dihedral_angle_3_deg 11.994 r_dihedral_angle_1_deg 7.795 r_mcangle_it 5.667 r_mcbond_it 3.669 r_mcbond_other 3.665 r_angle_refined_deg 1.603 r_angle_other_deg 0.814 r_chiral_restr 0.099 r_bond_refined_d 0.014 r_gen_planes_refined 0.008 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 920 Nucleic Acid Atoms Solvent Atoms 89 Heterogen Atoms 12
Software Software Software Name Purpose Aimless data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction XDS data reduction