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Human D-DT complexed with tartrate
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7.3 295 0.2 M Sodium tartrate dibasic dihydrate and 20% w/v Polyethylene glycol 3,350, pH 7.3, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.17 43.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 83.73 α = 90 b = 83.73 β = 90 c = 40.56 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 200 IMAGE PLATE RIGAKU RAXIS IV++ 2014-03-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE Cu FINE FOCUS 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 29.13 93.8 74442 27672
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.8 29.13 26344 1324 93.82 0.14639 0.14377 0.1564 0.19827 0.2076 RANDOM 14.236
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.13 0.07 0.13 -0.44
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.3 r_dihedral_angle_4_deg 18.727 r_dihedral_angle_3_deg 12.698 r_dihedral_angle_1_deg 6.392 r_long_range_B_refined 5.376 r_long_range_B_other 5.375 r_scangle_other 2.612 r_angle_refined_deg 1.769 r_scbond_it 1.715 r_scbond_other 1.698
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.3 r_dihedral_angle_4_deg 18.727 r_dihedral_angle_3_deg 12.698 r_dihedral_angle_1_deg 6.392 r_long_range_B_refined 5.376 r_long_range_B_other 5.375 r_scangle_other 2.612 r_angle_refined_deg 1.769 r_scbond_it 1.715 r_scbond_other 1.698 r_mcangle_it 1.508 r_mcangle_other 1.508 r_mcbond_it 1.047 r_mcbond_other 1.044 r_angle_other_deg 0.907 r_chiral_restr 0.113 r_bond_refined_d 0.019 r_gen_planes_refined 0.009 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2655 Nucleic Acid Atoms Solvent Atoms 544 Heterogen Atoms 30
Software Software Software Name Purpose CrystalClear data collection REFMAC refinement MOSFLM data reduction SCALA data scaling