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Carboplatin binding to HEWL under sodium iodide crystallisation conditions
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 4.7 295 20mg HEWL co-crystallised with 1.4mg carboplatin with 75?l DMSO, 462.5?l 0.1M NaAc and 462.5?l 1M NaI solution
Crystal Properties Matthews coefficient Solvent content 1.85 26
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 27.138 α = 90 b = 62.561 β = 92.59 c = 58.13 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD APEX II CCD 2013-12-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE BRUKER AXS MICROSTAR-H 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.796 58.07 94.3 0.099 11.7 5.7 17152
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.796 1.9 78 0.34 1.9 1.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 1.796 58.07 16272 880 94.26 0.18712 0.18425 0.189 0.24081 0.2428 RANDOM 12.512
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.13 0.18 -0.33 0.19
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.597 r_dihedral_angle_4_deg 21.637 r_dihedral_angle_3_deg 12.967 r_dihedral_angle_1_deg 6.987 r_long_range_B_refined 3.813 r_long_range_B_other 3.813 r_angle_refined_deg 1.663 r_angle_other_deg 1.297 r_scangle_other 1.157 r_mcangle_it 1.133
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.597 r_dihedral_angle_4_deg 21.637 r_dihedral_angle_3_deg 12.967 r_dihedral_angle_1_deg 6.987 r_long_range_B_refined 3.813 r_long_range_B_other 3.813 r_angle_refined_deg 1.663 r_angle_other_deg 1.297 r_scangle_other 1.157 r_mcangle_it 1.133 r_mcangle_other 1.133 r_mcbond_it 0.74 r_scbond_it 0.721 r_scbond_other 0.699 r_mcbond_other 0.654 r_chiral_restr 0.11 r_bond_refined_d 0.015 r_gen_planes_refined 0.008 r_bond_other_d 0.006 r_gen_planes_other 0.005 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2002 Nucleic Acid Atoms Solvent Atoms 147 Heterogen Atoms 70
Software Software Software Name Purpose REFMAC refinement