4OVW

ENDOGLUCANASE I COMPLEXED WITH EPOXYBUTYL CELLOBIOSE


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelOtherNATIVE STRUCTURE (2 MOLECULES IN ASYMMETRIC UNIT)

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7.522 % MEPEG 2K, 0.2 M MAGNESIUM CHLORIDE, PH 7.5 FOR 0.1 M TRIS. METHOD: HANGING DROP VAPOR DIFFUSION. THE PROTEIN SAMPLE HAD PREVIOUSLY BEEN INHIBITED WITH 8.25 MMOL 3,4-EPOXYBUTYL B-D-CELLOBIOSIDE FOR 3HRS., vapor diffusion - hanging drop
Crystal Properties
Matthews coefficientSolvent content
2.2946

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 65.94α = 90
b = 82.62β = 94.16
c = 73.16γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray120IMAGE PLATERIGAKU1994-07-21M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODERIGAKU FR-C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.318880.071
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.32.4470.2011.97

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE RNATIVE STRUCTURE (2 MOLECULES IN ASYMMETRIC UNIT)2.315870.180.27RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor20.3
p_transverse_tor20.2
p_planar_tor4.7
p_scangle_it3.656
p_mcangle_it2.689
p_scbond_it2.603
p_mcbond_it1.887
p_multtor_nbd0.258
p_xyhbond_nbd0.21
p_singtor_nbd0.179
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor20.3
p_transverse_tor20.2
p_planar_tor4.7
p_scangle_it3.656
p_mcangle_it2.689
p_scbond_it2.603
p_mcbond_it1.887
p_multtor_nbd0.258
p_xyhbond_nbd0.21
p_singtor_nbd0.179
p_chiral_restr0.146
p_planar_d0.043
p_angle_d0.042
p_bond_d0.013
p_angle_deg
p_hb_or_metal_coord
p_plane_restr
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms6060
Nucleic Acid Atoms
Solvent Atoms699
Heterogen Atoms74

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
REFMACrefinement