☰ Navigation Tabs
Crystal structure of apo carboxy cGMP binding domain of Plasmodium falciparum PKG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.5 295.1 0.2 M lithium sulfate, 25 % (w/v) PEG 3350 and 0.1 M Bis-Tris pH 5.5. , VAPOR DIFFUSION, temperature 295.1K
Crystal Properties Matthews coefficient Solvent content 1.82 32.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 25.781 α = 90 b = 57.683 β = 90 c = 82.78 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 77 CCD RAYONIX MX-225 2011-12-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 0.97931 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.888 33.63 99.6 0.088 18.2 6.9 10486 10442 1 1 18.04
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1.888 27.236 1.38 10438 10438 520 99.68 0.1798 0.1774 0.1807 0.2282 0.2295
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.232 f_angle_d 1.015 f_chiral_restr 0.042 f_bond_d 0.007 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1026 Nucleic Acid Atoms Solvent Atoms 51 Heterogen Atoms 20
Software Software Software Name Purpose Spec data collection PHASES phasing PHENIX refinement MOSFLM data reduction SCALA data scaling