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Mechanism of transhydrogenase coupling proton translocation and hydride transfer
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 298 50 mM MgCl2, 0.5 M trimethylamine N-oxide, 26% polyethylenglycol 400, 2% octyl glucoside, 0.1mM NADP, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K
Crystal Properties Matthews coefficient Solvent content 3.93 68.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 175.331 α = 90 b = 160.59 β = 128.36 c = 139.624 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL7-1 1.12709 SSRL BL7-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 6.926 38.9 98.3 5015 4922
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 6.926 38.9 4694 228 98.11 0.21598 0.21271 0.2174 0.28372 0.2866 RANDOM 160.054
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -21.34 -9.66 -16.37 23.52
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.52 r_long_range_B_refined 23.161 r_dihedral_angle_3_deg 19.273 r_dihedral_angle_4_deg 14.192 r_mcangle_it 9.321 r_mcbond_it 5.088 r_dihedral_angle_1_deg 4.964 r_scbond_it 3.848 r_angle_refined_deg 1.102 r_chiral_restr 0.064
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.52 r_long_range_B_refined 23.161 r_dihedral_angle_3_deg 19.273 r_dihedral_angle_4_deg 14.192 r_mcangle_it 9.321 r_mcbond_it 5.088 r_dihedral_angle_1_deg 4.964 r_scbond_it 3.848 r_angle_refined_deg 1.102 r_chiral_restr 0.064 r_bond_refined_d 0.006 r_gen_planes_refined 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 13434 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 184
Software Software Software Name Purpose Blu-Ice data collection PHASER phasing REFMAC refinement XDS data reduction SCALA data scaling