X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1lipidic subic phase8.5298350 mM NH4-formate, 100mM Na-thiocynate, and 18% (v/v) 1-4-butanediol, pH 8.5, lipidic subic phase, temperature 298.0K
Crystal Properties
Matthews coefficientSolvent content
3.4564.33

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 97.221α = 90
b = 86.388β = 93.99
c = 125.149γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100PIXELDECTRIS PILATUS 6MMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL11-10.97920SSRLBL11-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.07946.398.536118

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT3.07946.336118189998.460.222490.219450.27963RANDOM74.675
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
5.92-0.32-1.87-3.96
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.667
r_dihedral_angle_3_deg22.212
r_dihedral_angle_4_deg19.798
r_long_range_B_refined10.617
r_long_range_B_other10.616
r_mcangle_it7.475
r_mcangle_other7.475
r_scangle_other7.462
r_dihedral_angle_1_deg6.301
r_scbond_it4.798
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.667
r_dihedral_angle_3_deg22.212
r_dihedral_angle_4_deg19.798
r_long_range_B_refined10.617
r_long_range_B_other10.616
r_mcangle_it7.475
r_mcangle_other7.475
r_scangle_other7.462
r_dihedral_angle_1_deg6.301
r_scbond_it4.798
r_scbond_other4.798
r_mcbond_it4.736
r_mcbond_other4.729
r_angle_refined_deg1.548
r_angle_other_deg0.9
r_chiral_restr0.084
r_bond_refined_d0.011
r_gen_planes_refined0.006
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms10352
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
Blu-Icedata collection
PHASERphasing
REFMACrefinement
XDSdata reduction
SCALAdata scaling