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Crystal structure of Alkylhydroperoxide Reductase subunit F from E. coli at 2.65 Ang resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.5 296 0.1 M Tris-HCl pH 8.5, 2 M ammonium sulfate, 10 mM cadmium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystal Properties Matthews coefficient Solvent content 3.2 61.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 106.698 α = 90 b = 59.598 β = 113.68 c = 123.715 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 MIRRORS 2011-06-24 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSRRC BEAMLINE BL13B1 1.0, 1.55072, 1.58994, 1.59048 NSRRC BL13B1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.65 30 99 0.098 12.9 4 21022 -3 43.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.65 2.74 92.8 0.341 3.2 3.2
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MAD 2.65 28.82 1.34 19647 20674 1055 98.5 0.174 0.172 0.179 0.22 0.2358 43.91
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.67 -0.09 -0.46
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 15.893 f_angle_d 0.908 f_chiral_restr 0.048 f_bond_d 0.006 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3947 Nucleic Acid Atoms Solvent Atoms 162 Heterogen Atoms 94
Software Software Software Name Purpose SCALEPACK data scaling SOLOMON phasing REFMAC refinement PDB_EXTRACT data extraction DENZO data reduction autoSHARP phasing PHENIX refinement