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Subunit PA0372 of heterodimeric zinc protease PA0371-PA0372
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.25 298 15% PEG 4000, 0.1M Imidazole Malonate, pH 6.25, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.43 49.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 79.88 α = 90 b = 106.51 β = 90 c = 112.66 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M mirrors 2012-11-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.478 77.4 99.11 34856 34553 2 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.478 50 98
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION AB INITIO PHASING THROUGHOUT 2.478 77.4 33030 1521 99.13 0.2029 0.20177 0.2062 0.22704 0.2285 RANDOM 51.539
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.22 -1.39 1.62
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.19 r_dihedral_angle_4_deg 23.314 r_dihedral_angle_3_deg 23.185 r_long_range_B_refined 9.17 r_long_range_B_other 9.17 r_scangle_other 6.448 r_dihedral_angle_1_deg 5.663 r_mcangle_it 4.982 r_mcangle_other 4.982 r_scbond_it 4.233
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.19 r_dihedral_angle_4_deg 23.314 r_dihedral_angle_3_deg 23.185 r_long_range_B_refined 9.17 r_long_range_B_other 9.17 r_scangle_other 6.448 r_dihedral_angle_1_deg 5.663 r_mcangle_it 4.982 r_mcangle_other 4.982 r_scbond_it 4.233 r_scbond_other 4.082 r_angle_other_deg 3.595 r_mcbond_it 3.353 r_mcbond_other 3.353 r_angle_refined_deg 1.661 r_chiral_restr 0.157 r_bond_refined_d 0.026 r_gen_planes_refined 0.01 r_gen_planes_other 0.005 r_bond_other_d r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6293 Nucleic Acid Atoms Solvent Atoms 82 Heterogen Atoms 14
Software Software Software Name Purpose REFMAC refinement CNS refinement HKL-2000 data collection MOSFLM data reduction SCALA data scaling CNS phasing