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STRUCTURE OF KEAP1 KELCH DOMAIN WITH(1S,2R)-2-[(1S)-1-[(1-oxo-2,3-dihydro-1H-isoindol-2-Yl)methyl]-1,2,3,4-tetrahydroisoquinoline-2-Carbonyl]cyclohexane-1-carboxylic acid
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 296 1 UL OF PROTEIN AT 12 MG/ML IN 20 MM TRIS-HCL PH 7.5, 5 MM DTT, 5 MM COMPOUND 1 + 2 UL OF 2.15 M SODIUM ACETATE , VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K
Crystal Properties Matthews coefficient Solvent content 3.21 61.63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 76.18 α = 90 b = 127.13 β = 90 c = 131.11 γ = 90
Symmetry Space Group P 21 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M mIRROR 2012-10-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I24 0.96861 Diamond I24
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.55 32.68 99.9 42242 42242 2 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.55 99.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.55 32.67 42242 38651 2035 96.25 0.24573 0.24573 0.24358 0.2436 0.28692 0.2824 RANDOM 48.479
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.17 0.02 0.15
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.806 r_dihedral_angle_4_deg 18.323 r_dihedral_angle_3_deg 14.896 r_dihedral_angle_1_deg 5.993 r_long_range_B_other 4.37 r_long_range_B_refined 4.362 r_mcangle_it 2.845 r_mcangle_other 2.845 r_scangle_other 2.316 r_mcbond_it 1.576
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 32.806 r_dihedral_angle_4_deg 18.323 r_dihedral_angle_3_deg 14.896 r_dihedral_angle_1_deg 5.993 r_long_range_B_other 4.37 r_long_range_B_refined 4.362 r_mcangle_it 2.845 r_mcangle_other 2.845 r_scangle_other 2.316 r_mcbond_it 1.576 r_mcbond_other 1.575 r_scbond_it 1.259 r_scbond_other 1.259 r_angle_refined_deg 1.069 r_angle_other_deg 0.674 r_chiral_restr 0.058 r_bond_refined_d 0.005 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6593 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms 104
Software Software Software Name Purpose GDA data collection PHASER phasing REFMAC refinement XDS data reduction xia2 data scaling