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Revised structure of E. coli SSB
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1QVC PDB ENTRY 1QVC
Crystallization Crystal Properties Matthews coefficient Solvent content 1.97 37.57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 105.369 α = 90 b = 62.923 β = 112.57 c = 97.792 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1QVC 2.2 51.958 24955 23692 1263 82.65 0.21267 0.21267 0.20999 0.2078 0.26223 0.2571 RANDOM 71.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.72 0.4 2.59 -0.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.209 r_dihedral_angle_3_deg 23.499 r_dihedral_angle_4_deg 19.407 r_dihedral_angle_1_deg 9.448 r_scangle_it 3.41 r_scbond_it 2.257 r_angle_refined_deg 1.958 r_mcangle_it 1.92 r_angle_other_deg 1.11 r_mcbond_it 1.106
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 39.209 r_dihedral_angle_3_deg 23.499 r_dihedral_angle_4_deg 19.407 r_dihedral_angle_1_deg 9.448 r_scangle_it 3.41 r_scbond_it 2.257 r_angle_refined_deg 1.958 r_mcangle_it 1.92 r_angle_other_deg 1.11 r_mcbond_it 1.106 r_mcbond_other 0.356 r_chiral_restr 0.138 r_bond_refined_d 0.02 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3536 Nucleic Acid Atoms Solvent Atoms 145 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement