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Crystal Structure of an Enoyl-CoA Hydratase/Isomerase Family Member, NYSGRC target 028282
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6.5 289 0.2M Calcium Acetate, 0.1M Cacodylate pH 6.5, 40% PEG 300, VAPOR DIFFUSION, SITTING DROP, temperature 289K
Crystal Properties Matthews coefficient Solvent content 3.01 59.14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 160.455 α = 90 b = 160.455 β = 90 c = 178.691 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 173 CCD MARMOSAIC 225 mm CCD Beryllium Lenses 2013-06-19 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-F 0.97872 APS 21-ID-F
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 40 96.8 56774
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.24 84.6 0.549 1.95 3 2437
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 2.25 39.06 51216 2728 97.49 0.173 0.171 0.1782 0.2107 0.2127 RANDOM 25.6398
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.53 0.53 -1.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.287 r_dihedral_angle_4_deg 18.213 r_dihedral_angle_3_deg 13.513 r_dihedral_angle_1_deg 5.459 r_angle_refined_deg 1.804 r_angle_other_deg 1.239 r_chiral_restr 0.104 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d 0.008
Show All KeysRMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.287 r_dihedral_angle_4_deg 18.213 r_dihedral_angle_3_deg 13.513 r_dihedral_angle_1_deg 5.459 r_angle_refined_deg 1.804 r_angle_other_deg 1.239 r_chiral_restr 0.104 r_bond_refined_d 0.018 r_gen_planes_refined 0.01 r_bond_other_d 0.008 r_gen_planes_other 0.006
Hide All KeysNon-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5735 Nucleic Acid Atoms Solvent Atoms 565 Heterogen Atoms 15
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELX phasing REFMAC refinement PDB_EXTRACT data extraction HKL-3000 data reduction HKL-3000 data scaling SHELXD phasing