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Crystal Structure of the E.coli DhaR(N)-DhaL complex
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 microbatch, sitting drop 6.5 295 30% (v/v) 2-ethoxyethanol, pH 6.5, microbatch, sitting drop, temperature 295K
Crystal Properties Matthews coefficient Solvent content 3.17 61.22
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.766 α = 84.15 b = 91.5 β = 72.42 c = 93.808 γ = 90.01
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-225 2009-12-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 0.9793 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.32 91 97.5 0.09 9.6 3.9 119216
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.32 2.4 92.1 0.588 3.4 11317
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.32 90.91 119153 6008 97.27 0.2021 0.1997 0.1999 0.2474 0.2478 RANDOM 45.984
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.28 -0.23 0.06 -0.49 0.89 1.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.187 r_dihedral_angle_3_deg 20.016 r_dihedral_angle_4_deg 19.54 r_dihedral_angle_1_deg 5.972 r_scangle_it 4.452 r_scbond_it 2.74 r_angle_refined_deg 1.743 r_mcangle_it 1.576 r_mcbond_it 0.813 r_chiral_restr 0.126
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.187 r_dihedral_angle_3_deg 20.016 r_dihedral_angle_4_deg 19.54 r_dihedral_angle_1_deg 5.972 r_scangle_it 4.452 r_scbond_it 2.74 r_angle_refined_deg 1.743 r_mcangle_it 1.576 r_mcbond_it 0.813 r_chiral_restr 0.126 r_bond_refined_d 0.018 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 15367 Nucleic Acid Atoms Solvent Atoms 445 Heterogen Atoms 116
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction