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Crystal structure of monomeric TENCON variant P54CR4-31
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3TES PDBE ENTRY 3TES
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 4.5 293 0.1 M acetate, pH 4.5, 19% PEG8000, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.31 46.69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 50.52 α = 90 b = 64.13 β = 90 c = 194.55 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 95 CCD RIGAKU SATURN 944 VARIMAX HF 2010-06-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-007 HF 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.544 29 98.4 0.056 13.1 21214 21214 -3 39.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.544 2.61 83.9 0.321 4.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDBE ENTRY 3TES 2.544 15 20013 20013 1083 98.4 0.20112 0.20112 0.19701 0.27517 0.2403 RANDOM 53.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.62 -0.42 -0.2
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 41.419 r_scbond_it 37.721 r_dihedral_angle_2_deg 35.672 r_dihedral_angle_3_deg 16.395 r_dihedral_angle_4_deg 12.298 r_mcangle_it 6.659 r_dihedral_angle_1_deg 6.334 r_mcbond_it 3.743 r_angle_refined_deg 1.231 r_chiral_restr 0.079
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 41.419 r_scbond_it 37.721 r_dihedral_angle_2_deg 35.672 r_dihedral_angle_3_deg 16.395 r_dihedral_angle_4_deg 12.298 r_mcangle_it 6.659 r_dihedral_angle_1_deg 6.334 r_mcbond_it 3.743 r_angle_refined_deg 1.231 r_chiral_restr 0.079 r_bond_refined_d 0.009 r_gen_planes_refined
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4237 Nucleic Acid Atoms Solvent Atoms 165 Heterogen Atoms
Software Software Software Name Purpose StructureStudio data collection PHASER phasing REFMAC refinement XDS data reduction XDS data scaling