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Crystal structures of human p70S6K1-T389A (form II)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 hanging drop 7.2 289 2M lithium sulfate, 0.05M magnesium sulfate, 0.05M HEPES, pH 7.2, hanging drop, temperature 289K
Crystal Properties Matthews coefficient Solvent content 2.56 52.04
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 77.961 α = 90 b = 77.961 β = 90 c = 113.829 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD CCD ADSC unsupported-q315 2012-02-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRF BEAMLINE BL17U 0.9797 SSRF BL17U
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.9 50 98.8 0.134 9.7 3.9 9546
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.9 3 99.7 0.376 4.1 932
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.9 50 9135 475 98.19 0.2459 0.2432 0.2399 0.2978 0.2478 RANDOM 39.5494
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.34 0.67 1.34 -2.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.427 r_dihedral_angle_3_deg 17.95 r_dihedral_angle_4_deg 15.147 r_dihedral_angle_1_deg 6.221 r_mcangle_it 4.546 r_scangle_it 4.539 r_mcbond_it 2.758 r_scbond_it 2.697 r_rigid_bond_restr 2.646 r_angle_refined_deg 1.576
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.427 r_dihedral_angle_3_deg 17.95 r_dihedral_angle_4_deg 15.147 r_dihedral_angle_1_deg 6.221 r_mcangle_it 4.546 r_scangle_it 4.539 r_mcbond_it 2.758 r_scbond_it 2.697 r_rigid_bond_restr 2.646 r_angle_refined_deg 1.576 r_chiral_restr 0.11 r_bond_refined_d 0.012 r_gen_planes_refined 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2558 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 44
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction