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Deciphering cis-trans directionality and visualizing autophosphorylation in histidine kinases.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 294 2% PEG 1000, 2% PEG 4000, 0.03M sodium acetate, Hepes pH 7.5, ammonium sulfate 1.5M, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 4.87 74.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 163.686 α = 90 b = 163.686 β = 90 c = 130.093 γ = 120
Symmetry Space Group P 65 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL PSI PILATUS 6M 2013-02-27 M SINGLE WAVELENGTH 2 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2012-07-12 M SAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I24 Diamond I24 2 SYNCHROTRON ESRF BEAMLINE ID29 ESRF ID29
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3 29.58 0.074 10.6 20516 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3 3.16 98.5 0.939 2.3 10.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 3 29.58 19482 1034 97.1 0.196 0.194 0.234 0.2148 RANDOM 106.19
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.38 -1.38 -1.38 4.49
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.672 r_dihedral_angle_4_deg 19.001 r_dihedral_angle_3_deg 18.834 r_mcangle_it 7.668 r_scbond_it 6.031 r_dihedral_angle_1_deg 5.619 r_mcbond_it 4.98 r_mcbond_other 4.979 r_angle_refined_deg 1.286 r_angle_other_deg 0.752
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.672 r_dihedral_angle_4_deg 19.001 r_dihedral_angle_3_deg 18.834 r_mcangle_it 7.668 r_scbond_it 6.031 r_dihedral_angle_1_deg 5.619 r_mcbond_it 4.98 r_mcbond_other 4.979 r_angle_refined_deg 1.286 r_angle_other_deg 0.752 r_chiral_restr 0.066 r_bond_refined_d 0.008 r_bond_other_d 0.005 r_gen_planes_refined 0.004 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3366 Nucleic Acid Atoms Solvent Atoms 19 Heterogen Atoms 54
Software Software Software Name Purpose PHASER phasing REFMAC refinement XDS data reduction SCALA data scaling