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HCV NS5B GT1B N316 with GSK5852A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 298 0.1M citrate pH5.0, 17% PEG4000, 10% glycerol, vapor diffusion, hanging drop, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.29 46.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.708 α = 90 b = 107.451 β = 90 c = 126.382 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RIGAKU SATURN 944 MULTILAYER MIRRORS 2010-01-01 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU FR-E+ SUPERBRIGHT
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.191 126.382 100 0.105 0.105 14.2 7.2 61392
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.191 2.31 99.9 0.496 0.496 1.6 7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.3 81.86 50439 53131 2692 100 0.201 0.198 0.1992 0.24 0.2423 RANDOM 21.09
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.21 0.86 -1.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.099 r_dihedral_angle_4_deg 13.618 r_dihedral_angle_3_deg 11.149 r_dihedral_angle_1_deg 5.026 r_scangle_it 1.528 r_angle_refined_deg 0.968 r_angle_other_deg 0.913 r_scbond_it 0.913 r_mcangle_it 0.624 r_mcbond_it 0.32
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 33.099 r_dihedral_angle_4_deg 13.618 r_dihedral_angle_3_deg 11.149 r_dihedral_angle_1_deg 5.026 r_scangle_it 1.528 r_angle_refined_deg 0.968 r_angle_other_deg 0.913 r_scbond_it 0.913 r_mcangle_it 0.624 r_mcbond_it 0.32 r_chiral_restr 0.051 r_mcbond_other 0.049 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 8389 Nucleic Acid Atoms Solvent Atoms 548 Heterogen Atoms 156
Software Software Software Name Purpose SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction XSCALE data scaling MOLREP phasing