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Crystal Structure of FosB from Bacillus cereus with Manganese and L-Cysteine-Fosfomycin Product
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 298 PEG 3350, Magnesium formate , pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 2.34 47.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 64.292 α = 90 b = 68.309 β = 90 c = 70.183 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD RAYONIX MX-300 2012-06-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 21-ID-D 1.078 APS 21-ID-D
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 50 97.9 0.066 8.8 7.4 44593
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.55 1.58 95.6 0.453 7.3 2150
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.55 48.95 44546 2246 97.81 0.1359 0.1333 0.1308 0.1864 0.185 RANDOM 15.6737
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.14 0.23 0.91
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.733 r_sphericity_free 20.423 r_dihedral_angle_4_deg 15.275 r_dihedral_angle_3_deg 13.413 r_sphericity_bonded 11.617 r_rigid_bond_restr 8.108 r_dihedral_angle_1_deg 6.395 r_angle_refined_deg 2.072 r_chiral_restr 0.162 r_bond_refined_d 0.021
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 42.733 r_sphericity_free 20.423 r_dihedral_angle_4_deg 15.275 r_dihedral_angle_3_deg 13.413 r_sphericity_bonded 11.617 r_rigid_bond_restr 8.108 r_dihedral_angle_1_deg 6.395 r_angle_refined_deg 2.072 r_chiral_restr 0.162 r_bond_refined_d 0.021 r_gen_planes_refined 0.013
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2326 Nucleic Acid Atoms Solvent Atoms 258 Heterogen Atoms 37
Software Software Software Name Purpose SCALEPACK data scaling REFMAC refinement PDB_EXTRACT data extraction HKL-2000 data collection HKL-2000 data reduction PHASER phasing