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Increasing the Efficiency Efficiency of Ligands for the FK506-Binding Protein 51 by Conformational Control: Complex of FKBP51 with compound 1-[(9S,13R,13aR)-1,3-dimethoxy-8-oxo-5,8,9,10,11,12,13,13a-octahydro-6H-9,13-epiminoazocino[2,1-a]isoquinolin-14-yl]-2-(3,4,5-trimethoxyphenyl)ethane-1,2-dione
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.5 293 37.5% PEG3350, 0.1 M NH4OAc, 0.1 M HEPES pH 7.5, 10% DMSO, vapor diffusion, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.29 46.38
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 42.051 α = 90 b = 54.192 β = 90 c = 55.96 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 300 mm CCD 2008-07-16 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA 1.000 SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.05 27.984 95.3 0.061 0.061 16.2 5.5 57507 57507 -1 -1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.05 1.11 72.9 0.402 0.402 1.7 3.8 6306
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.05 20 57436 57436 2871 95.16 0.1382 0.1382 0.1372 0.1443 0.158 0.1664 RANDOM 15.0313
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.14 -0.19 0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.681 r_dihedral_angle_4_deg 28.043 r_dihedral_angle_3_deg 14.018 r_scangle_it 8.194 r_dihedral_angle_1_deg 7.185 r_scbond_it 5.613 r_mcangle_it 3.623 r_mcbond_it 2.416 r_angle_refined_deg 2.19 r_rigid_bond_restr 2.051
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 31.681 r_dihedral_angle_4_deg 28.043 r_dihedral_angle_3_deg 14.018 r_scangle_it 8.194 r_dihedral_angle_1_deg 7.185 r_scbond_it 5.613 r_mcangle_it 3.623 r_mcbond_it 2.416 r_angle_refined_deg 2.19 r_rigid_bond_restr 2.051 r_angle_other_deg 1.593 r_mcbond_other 1.228 r_chiral_restr 0.217 r_bond_refined_d 0.025 r_gen_planes_refined 0.013 r_bond_other_d 0.003 r_gen_planes_other 0.003
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 962 Nucleic Acid Atoms Solvent Atoms 198 Heterogen Atoms 48
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling REFMAC refinement PDB_EXTRACT data extraction