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Crystal Structure of Human C16orf57
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5.6 291 25% PEG 4000, 0.2 M ammonium sulphate, 0.1 M Na citrate pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Crystal Properties Matthews coefficient Solvent content 2.24 45.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 43.247 α = 90 b = 51.07 β = 107.44 c = 48.013 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2011-05-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.97950 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.1 45.81 99 0.076 0.076 12 5.2 79339 7.53
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.1 1.16 99 0.324 0.324 2.3 3.5 11429
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (I) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 1.1 45.81 2 2 75335 3982 98.85 0.13276 0.13163 0.1407 0.15434 0.1611 RANDOM 11.759
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.22 0.09 -0.05 -0.12
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 40.743 r_dihedral_angle_2_deg 33.113 r_dihedral_angle_4_deg 16.54 r_dihedral_angle_3_deg 12.894 r_sphericity_bonded 12.556 r_rigid_bond_restr 8.414 r_dihedral_angle_1_deg 6.367 r_angle_refined_deg 2.225 r_angle_other_deg 1.744 r_chiral_restr 0.135
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 40.743 r_dihedral_angle_2_deg 33.113 r_dihedral_angle_4_deg 16.54 r_dihedral_angle_3_deg 12.894 r_sphericity_bonded 12.556 r_rigid_bond_restr 8.414 r_dihedral_angle_1_deg 6.367 r_angle_refined_deg 2.225 r_angle_other_deg 1.744 r_chiral_restr 0.135 r_bond_refined_d 0.027 r_gen_planes_refined 0.012 r_bond_other_d 0.003 r_gen_planes_other 0.003 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_scbond_it r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1538 Nucleic Acid Atoms Solvent Atoms 203 Heterogen Atoms 7
Software Software Software Name Purpose SHARP phasing REFMAC refinement MOSFLM data reduction SCALA data scaling