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T. Maritima FDTS (E144R mutant) plus FAD
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1O26 PDB ENTRY 1O26
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 295 50-60% PEG 200 and 100mM Tris HCL (pH 8.0), VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.04 39.81
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 54.13 α = 90 b = 117.06 β = 90 c = 142.07 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARMOSAIC 325 mm CCD mirrors 2010-07-27 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SSRL BEAMLINE BL9-2 0.9809 SSRL BL9-2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.97 30 98.6 0.06 16.4 4.2 63939 63939
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.97 2.02 99.6 0.886 1.6 4.3 4737
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION Rigid Body refinement THROUGHOUT PDB ENTRY 1O26 1.97 29.26 60636 60636 3239 98.72 0.19543 0.19331 0.1983 0.23573 0.2401 RANDOM 35.199
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.43 -0.89 -1.54
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.434 r_dihedral_angle_4_deg 19.888 r_dihedral_angle_3_deg 16.091 r_dihedral_angle_1_deg 6.379 r_scangle_it 3.549 r_scbond_it 2.317 r_angle_refined_deg 1.638 r_mcangle_it 1.402 r_angle_other_deg 0.966 r_mcbond_it 0.821
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 34.434 r_dihedral_angle_4_deg 19.888 r_dihedral_angle_3_deg 16.091 r_dihedral_angle_1_deg 6.379 r_scangle_it 3.549 r_scbond_it 2.317 r_angle_refined_deg 1.638 r_mcangle_it 1.402 r_angle_other_deg 0.966 r_mcbond_it 0.821 r_mcbond_other 0.243 r_chiral_restr 0.097 r_bond_refined_d 0.016 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7261 Nucleic Acid Atoms Solvent Atoms 265 Heterogen Atoms 194
Software Software Software Name Purpose Blu-Ice data collection REFMAC refinement XDS data reduction XDS data scaling REFMAC phasing