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Crystal Structure of Aeropyrum pernix Peroxiredoxin Q Enzyme in Fully-Folded and Locally-Unfolded Conformations
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2CX4 PDB ENTRY 2CX4
Crystallization Crystal Properties Matthews coefficient Solvent content 3.12 60.59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 132.388 α = 90 b = 132.388 β = 90 c = 106.536 γ = 90
Symmetry Space Group P 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2CX4 2 49.42 63966 3267 99.49 0.1969 0.1948 0.2084 0.2345 0.247 RANDOM 60.9005
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.0582 3.0582 -6.1163
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 17.52 t_omega_torsion 3.26 t_angle_deg 1.1 t_bond_d 0.01 t_dihedral_angle_d t_trig_c_planes t_gen_planes t_it t_chiral_improper_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 5164 Nucleic Acid Atoms Solvent Atoms 272 Heterogen Atoms 189
Software Software Software Name Purpose BUSTER-TNT refinement PDB_EXTRACT data extraction BUSTER refinement