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Lassa nucleoprotein with dsRNA reveals novel mechanism for immune suppression
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 4.5 293 18% PEG MME 5000, 0.1M Na-citrate, pH4.5, 2.4% PEG MME350, EVAPORATION, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.24 45.03
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.744 α = 90 b = 46.744 β = 90 c = 217.315 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 196 PIXEL PSI PILATUS 6M 2011-06-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 0.8726 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.99 39.22 0.118 0.118 6.8 3.2 15723 2 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION THROUGHOUT 2.03 54.33 15723 836 99.96 0.20496 0.2032 0.24041 0.251 RANDOM 21.387
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.78 -1.78 3.56
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.427 r_sphericity_free 22.653 r_dihedral_angle_4_deg 15.936 r_dihedral_angle_3_deg 12.443 r_sphericity_bonded 5.83 r_dihedral_angle_1_deg 5.424 r_rigid_bond_restr 4.191 r_angle_refined_deg 1.095 r_angle_other_deg 0.784 r_chiral_restr 0.069
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.427 r_sphericity_free 22.653 r_dihedral_angle_4_deg 15.936 r_dihedral_angle_3_deg 12.443 r_sphericity_bonded 5.83 r_dihedral_angle_1_deg 5.424 r_rigid_bond_restr 4.191 r_angle_refined_deg 1.095 r_angle_other_deg 0.784 r_chiral_restr 0.069 r_bond_refined_d 0.007 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_scbond_it r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1613 Nucleic Acid Atoms 172 Solvent Atoms 88 Heterogen Atoms 1
Software Software Software Name Purpose iMOSFLM data reduction PHASER phasing REFMAC refinement SCALA data scaling