☰ Navigation Tabs
Wild Type Fe-type Nitrile Hydratase from Comamonas testosteroni Ni1
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1AHJ
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 292 1.08 M K2HPO4, 0.49 M NaH2PO4, 25 or 30%(v/v) glycerol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 292K
Crystal Properties Matthews coefficient Solvent content 4.64 73.49
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 111.401 α = 90 b = 111.401 β = 90 c = 475.31 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2010-10-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 19-ID 0.98 APS 19-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.384 36.156 99.5 0.133 11 4.9 262123
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.384 2.4108 99.2 0.602 1
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT 1ahj 2.384 36.156 1.96 261510 13140 99.35 0.1902 0.1882 0.1846 0.2271 0.2228 Random
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 11.5339 11.5339 -20.2005
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 16.093 f_angle_d 1.375 f_chiral_restr 0.096 f_bond_d 0.011 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 25584 Nucleic Acid Atoms Solvent Atoms 1686 Heterogen Atoms 48
Software Software Software Name Purpose HKL-3000 data collection PHASES phasing PHENIX refinement MOSFLM data reduction SCALA data scaling