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Triple mutant Src SH2 domain bound to phosphotyrosine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7.6 277 0.1 M Tris-HCl, 18% PEG6000, 0.2 M lithium chloride, pH 7.6, vapor diffusion, sitting drop, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.43 49.4
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 67.6 α = 90 b = 67.6 β = 90 c = 46.8 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 114 IMAGE PLATE MAR scanner 345 mm plate 2011-10-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R 1.5418
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.57 19.514 90.2 0.045 30.2 8.2 15470 15470
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.57 1.65 100 0.266 0.266 2.9 8 2498
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.57 19.51 15437 15437 724 90.15 0.1996 0.1996 0.1981 0.1946 0.2303 0.225 RANDOM 24.6385
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.47 0.23 0.47 -0.7
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.289 r_dihedral_angle_3_deg 11.898 r_dihedral_angle_4_deg 10.776 r_dihedral_angle_1_deg 6.536 r_scangle_it 3.832 r_scbond_it 2.4 r_mcangle_it 1.501 r_angle_refined_deg 1.441 r_mcbond_it 0.833 r_chiral_restr 0.094
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 26.289 r_dihedral_angle_3_deg 11.898 r_dihedral_angle_4_deg 10.776 r_dihedral_angle_1_deg 6.536 r_scangle_it 3.832 r_scbond_it 2.4 r_mcangle_it 1.501 r_angle_refined_deg 1.441 r_mcbond_it 0.833 r_chiral_restr 0.094 r_bond_refined_d 0.012 r_gen_planes_refined 0.007
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 867 Nucleic Acid Atoms Solvent Atoms 123 Heterogen Atoms 17
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling MOLREP phasing REFMAC refinement PDB_EXTRACT data extraction MAR345dtb data collection