☰ Navigation Tabs
human IgG1 Fc fragment Heterodimer
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 7 295 50 mM Hepes, pH 7.0, 1% Tryptone, and 20% PEG 3350, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.74 55.19
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.929 α = 90 b = 81.292 β = 90 c = 136.151 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2011-09-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 1.0 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 50 99.9 0.078 28.7 6.9 43830
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 1.97 100 0.471 3.44 6.4 4309
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.91 30 41549 2201 99.53 0.20638 0.20484 0.2115 0.23658 0.2441 RANDOM 32.058
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.46 -0.9 1.36
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.522 r_dihedral_angle_4_deg 15.253 r_dihedral_angle_3_deg 13.694 r_dihedral_angle_1_deg 5.716 r_scangle_it 2.186 r_scbond_it 1.459 r_angle_refined_deg 1.265 r_angle_other_deg 1.091 r_mcangle_it 0.823 r_mcbond_it 0.748
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.522 r_dihedral_angle_4_deg 15.253 r_dihedral_angle_3_deg 13.694 r_dihedral_angle_1_deg 5.716 r_scangle_it 2.186 r_scbond_it 1.459 r_angle_refined_deg 1.265 r_angle_other_deg 1.091 r_mcangle_it 0.823 r_mcbond_it 0.748 r_symmetry_vdw_other 0.254 r_nbd_other 0.189 r_nbd_refined 0.18 r_nbtor_refined 0.172 r_symmetry_hbond_refined 0.161 r_xyhbond_nbd_refined 0.126 r_chiral_restr 0.122 r_mcbond_other 0.114 r_nbtor_other 0.09 r_symmetry_vdw_refined 0.079 r_bond_refined_d 0.009 r_gen_planes_refined 0.004 r_bond_other_d 0.003 r_gen_planes_other 0.001 r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3355 Nucleic Acid Atoms Solvent Atoms 436 Heterogen Atoms 198
Software Software Software Name Purpose BOS data collection PHASER phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling