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Crystal Structure of DAD2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.1 291 (NH4)2HPO4 0.6M, pH 7.1, vapor diffusion, temperature 291K
Crystal Properties Matthews coefficient Solvent content 3.01 59.18
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 129.26 α = 90 b = 129.26 β = 90 c = 129.26 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210r 2011-03-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON AUSTRALIAN SYNCHROTRON BEAMLINE MX2 0.979417 Australian Synchrotron MX2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.15 40.876 100 0.126 0.126 20.1 21.7 19684 19684 23.6
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.15 2.27 100 0.458 0.458 7.7 22.1 2848
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.15 40.876 19671 1006 99.91 0.1692 0.167 0.1667 0.2106 0.2038 RANDOM 26.5934
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.147 r_dihedral_angle_4_deg 20.005 r_dihedral_angle_3_deg 15.762 r_dihedral_angle_1_deg 5.921 r_scangle_it 4.05 r_scbond_it 2.5 r_angle_refined_deg 1.491 r_mcangle_it 1.471 r_angle_other_deg 0.961 r_mcbond_it 0.766
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.147 r_dihedral_angle_4_deg 20.005 r_dihedral_angle_3_deg 15.762 r_dihedral_angle_1_deg 5.921 r_scangle_it 4.05 r_scbond_it 2.5 r_angle_refined_deg 1.491 r_mcangle_it 1.471 r_angle_other_deg 0.961 r_mcbond_it 0.766 r_mcbond_other 0.207 r_chiral_restr 0.107 r_bond_refined_d 0.016 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2064 Nucleic Acid Atoms Solvent Atoms 182 Heterogen Atoms 14
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling PHASER phasing REFMAC refinement PDB_EXTRACT data extraction Blu-Ice data collection