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Gonadotropin-releasing hormone agonist
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.2 300 MM POTASSIUM PHOSPHATE BUFFER, PH 6.2 MIXED WITH 80 MG/ML TRIPTORELIN IN WATER.
Crystal Properties Matthews coefficient Solvent content 1.42 14
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.9 α = 90 b = 27.47 β = 98.83 c = 13.15 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r KB MIRRORS 2011-07-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SOLEIL BEAMLINE PROXIMA 1 SOLEIL PROXIMA 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.85 41.95 98.6 0.07 25.6 26.6 24802 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.85 0.87 88 0.2 5.4 6.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION DIRECT METHODS THROUGHOUT NONE 0.85 41.95 24802 1306 98.63 0.08038 0.08001 0.08 0.08739 0.0875 RANDOM 1.746
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.02 0.08
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.492 r_dihedral_angle_4_deg 15.6 r_dihedral_angle_3_deg 10.81 r_dihedral_angle_1_deg 7.556 r_rigid_bond_restr 5.515 r_sphericity_free 5.404 r_sphericity_bonded 2.528 r_angle_refined_deg 1.647 r_long_range_B_refined 1.227 r_long_range_B_other 1.092
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.492 r_dihedral_angle_4_deg 15.6 r_dihedral_angle_3_deg 10.81 r_dihedral_angle_1_deg 7.556 r_rigid_bond_restr 5.515 r_sphericity_free 5.404 r_sphericity_bonded 2.528 r_angle_refined_deg 1.647 r_long_range_B_refined 1.227 r_long_range_B_other 1.092 r_angle_other_deg 0.875 r_scangle_other 0.697 r_scbond_it 0.509 r_scbond_other 0.508 r_mcangle_it 0.5 r_mcangle_other 0.499 r_mcbond_it 0.41 r_mcbond_other 0.404 r_chiral_restr 0.088 r_gen_planes_refined 0.018 r_bond_refined_d 0.015 r_bond_other_d 0.009 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 380 Nucleic Acid Atoms Solvent Atoms 45 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling SHELXD phasing