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Crystal structure of the NSL1-WDS-NSL2 complex.
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2G99 PDB ENTRY 2G99
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.6 20% (W/V) PEG 3350, 0.2 M DI-AMMONIUM TARTRATE, PH 6.6
Crystal Properties Matthews coefficient Solvent content 2.12 0.44
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 81.48 α = 90 b = 86.21 β = 90 c = 47.62 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2013-05-13 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE BM14 ESRF BM14
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.3 100 99.4 0.09 15.3 4.4 15438 2.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.3 2.4 98.9 0.73 2.3 4.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2G99 2.3 37.11 14628 775 99.4 0.20881 0.20689 0.24471 0.2044 RANDOM 42.275
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.27 -1.46 2.73
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.926 r_dihedral_angle_3_deg 13.654 r_dihedral_angle_4_deg 13.134 r_dihedral_angle_1_deg 6.848 r_mcangle_it 2.654 r_scbond_it 1.842 r_mcbond_it 1.682 r_mcbond_other 1.682 r_angle_refined_deg 1.145 r_angle_other_deg 0.692
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 30.926 r_dihedral_angle_3_deg 13.654 r_dihedral_angle_4_deg 13.134 r_dihedral_angle_1_deg 6.848 r_mcangle_it 2.654 r_scbond_it 1.842 r_mcbond_it 1.682 r_mcbond_other 1.682 r_angle_refined_deg 1.145 r_angle_other_deg 0.692 r_chiral_restr 0.067 r_bond_refined_d 0.006 r_gen_planes_refined 0.005 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2483 Nucleic Acid Atoms Solvent Atoms 28 Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement XDS data reduction XSCALE data scaling PHASER phasing