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Neutron Structure of Ferric Cytochrome c Peroxidase - Deuterium exchanged at room temperature
X-RAY DIFFRACTION - NEUTRON DIFFRACTION
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6 PH 6.0
Crystal Properties Matthews coefficient Solvent content 3.18 61.27
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 51.7 α = 90 b = 76.8 β = 90 c = 107.6 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 290 IMAGE PLATE MAR scanner 345 mm plate 2013-10-01 M 2 1 neutron 290 IMAGE PLATE 2013-08-01
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SEALED TUBE Xenocs GeniX 3D Cu HF 1.5418 2 NUCLEAR REACTOR ILL BEAMLINE LADI III 3.2-4.2 ILL LADI III
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Rrim I (All) Rpim I (All) CC (Half) R Split (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.1 14.8 94.7 0.061 14.6 3.5 24307 2 2.4 39.7 73.8 0.151 7.6 3.8 12695
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) R Merge I (Observed) R-Sym I (Observed) Rrim I (All) Rpim I (All) CC (Half) R Split (All) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.1 2.15 0.243 4.6 2.4 2 2.4 2.53 0.194 4.4 2.4
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Cut-off Sigma (I) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION 2.1 14.77 1.37 24307 2430 94.9 0.1381 0.1337 0.1294 0.1766 0.1679 NEUTRON DIFFRACTION 2.407 39.84 1.58 12695 1270 73.76 0.1826 0.1759 0.2433
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.1778 5.9821 -8.1599 -2.5352 9.999 -7.4638
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 17.659 f_dihedral_angle_d 17.659 f_angle_d 1.349 f_angle_d 1.349 f_chiral_restr 0.089 f_chiral_restr 0.089 f_bond_d 0.012 f_bond_d 0.012 f_plane_restr 0.008 f_plane_restr 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2357 Nucleic Acid Atoms Solvent Atoms 198 Heterogen Atoms 43
Software Software Software Name Purpose PHENIX model building PHENIX refinement LAUEGEN data reduction SCALA data scaling PHENIX phasing PHENIX phasing PHENIX phasing