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CRYSTAL STRUCTURE OF WT HUMAN CRMP-4 from lattice translocation
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4CNS PDB ENTRY 4CNS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 23% (W/V) PEG 3350, 200 MM NA TARTRATE, 100 MM BIS-TRIS PROPANE PH 7.0, 50 MM NA FLUORIDE
Crystal Properties Matthews coefficient Solvent content 2.43 49.3
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 96.24 α = 90 b = 108.22 β = 90 c = 118.19 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH MIRRORS 2012-02-25 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I911-3 MAX II I911-3
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.8 39.4 93.2 0.24 4.9 5.7 28951 -3 34.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.8 2.95 84.4 1.21 1.2 5.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 4CNS 2.8 39.43 27454 1465 93.03 0.25725 0.25523 0.3221 0.29484 0.358 RANDOM 46.273
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.74 -1.53 -1.22
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.627 r_dihedral_angle_3_deg 13.973 r_dihedral_angle_4_deg 13.657 r_dihedral_angle_1_deg 5.603 r_mcangle_it 2.429 r_mcbond_it 1.424 r_mcbond_other 1.421 r_scbond_it 1.184 r_angle_refined_deg 0.981 r_angle_other_deg 0.698
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.627 r_dihedral_angle_3_deg 13.973 r_dihedral_angle_4_deg 13.657 r_dihedral_angle_1_deg 5.603 r_mcangle_it 2.429 r_mcbond_it 1.424 r_mcbond_other 1.421 r_scbond_it 1.184 r_angle_refined_deg 0.981 r_angle_other_deg 0.698 r_chiral_restr 0.055 r_bond_refined_d 0.005 r_gen_planes_refined 0.003 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7512 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction Aimless data scaling PHASER phasing