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Crystal structure of the Fab portion of Olokizumab in complex with IL- 6
Crystallization Crystal Properties Matthews coefficient Solvent content 4.84 74.58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 241.988 α = 90 b = 241.988 β = 90 c = 76.591 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.2 35 98 0.12 10.8 5.6 126842 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.2 2.32 98 0.34 4.2 5.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.2 30 120388 6411 97.51 0.17807 0.17608 0.1785 0.21549 0.2186 RANDOM 22.986
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.28 0.64 1.28 -1.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.284 r_dihedral_angle_4_deg 17.634 r_dihedral_angle_3_deg 13.756 r_dihedral_angle_1_deg 5.737 r_scangle_it 4.622 r_scbond_it 3.024 r_mcangle_it 1.88 r_angle_refined_deg 1.115 r_mcbond_it 0.931 r_chiral_restr 0.076
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.284 r_dihedral_angle_4_deg 17.634 r_dihedral_angle_3_deg 13.756 r_dihedral_angle_1_deg 5.737 r_scangle_it 4.622 r_scbond_it 3.024 r_mcangle_it 1.88 r_angle_refined_deg 1.115 r_mcbond_it 0.931 r_chiral_restr 0.076 r_bond_refined_d 0.008 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9323 Nucleic Acid Atoms Solvent Atoms 1587 Heterogen Atoms 47
Software Software Software Name Purpose REFMAC refinement PHASER phasing