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Ca-bound truncated (delta13C) and C3S, C81S and C86S mutated S100A4 complexed with non-muscle myosin IIA
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 3ZWH PDB ENTRY 3ZWH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 0.1 M MIB, PH 4, 25% W/V PEG 1500
Crystal Properties Matthews coefficient Solvent content 4.11 34.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.72 α = 88.65 b = 38.79 β = 75.54 c = 71.43 γ = 72.17
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD 2011-09-11 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.37 31.8 98.5 0.07 10.9 3.5 79285 3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.37 1.44 94.5 0.55 2.2 2.6
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 3ZWH 1.37 31.772 2 79280 2376 98.59 0.162 0.1611 0.1647 0.1928 0.1959 10.64
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.779 f_angle_d 1.873 f_chiral_restr 0.084 f_bond_d 0.035 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3129 Nucleic Acid Atoms Solvent Atoms 318 Heterogen Atoms 8
Software Software Software Name Purpose PHENIX refinement XDS data reduction SCALEPACK data scaling CCP4 phasing