☰ Navigation Tabs
Structure of the NOT module of the human CCR4-NOT complex (CNOT1-CNOT2-CNOT3)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4C0E PDB ENTRIES 4C0E, 4C0F, 4C0G experimental model PDB 4C0F PDB ENTRIES 4C0E, 4C0F, 4C0G experimental model PDB 4C0G PDB ENTRIES 4C0E, 4C0F, 4C0G
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 0.1M MES PH=6.5, 12% PEG20000
Crystal Properties Matthews coefficient Solvent content 3 59.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 91.57 α = 90 b = 165.92 β = 90 c = 78.83 γ = 90
Symmetry Space Group P 21 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M DYNAMICALLY BENDABLE MIRROR 2012-08-20 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.2 48.5 98.9 0.12 10.1 3.3 20282 -3 62.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.2 3.28 98.9 0.56 2.2 3.4
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRIES 4C0E, 4C0F, 4C0G 3.2 48.48 1.99 20241 1035 98.81 0.2262 0.2239 0.2212 0.2726 0.2689 71.5
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.4448 -28.7177 26.2728
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 9.655 f_angle_d 0.515 f_chiral_restr 0.038 f_bond_d 0.002 f_plane_restr 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6864 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms
Software Software Software Name Purpose PHENIX refinement XDS data reduction XSCALE data scaling PHASER phasing