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Fitting of the bacteriophage Phi8 P1 capsid protein into cryo-EM density
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 4BTP
Sample PSEUDOMONAS PHAGE PHI8
Specimen Preparation Sample Aggregation State PARTICLE Vitrification Instrument HOMEMADE PLUNGER Cryogen Name ETHANE Sample Vitrification Details
3D Reconstruction Reconstruction Method SINGLE PARTICLE Number of Particles 12867 Reported Resolution (Å) 8.7 Resolution Method Other Details COORDINATES FITTED TO CRYO-EM MAP EMD-1300 Refinement Type Symmetry Type POINT Point Symmetry I
Map-Model Fitting and Refinement Id 1 (4BTP) Refinement Space REAL Refinement Protocol OTHER Refinement Target Overall B Value Fitting Procedure Details REFINEMENT PROTOCOL--X-RAY
Data Acquisition Detector Type KODAK SO-163 FILM Electron Dose (electrons/Å**2)
Imaging Experiment 1 Date of Experiment Temperature (Kelvin) Microscope Model FEI TECNAI F20 Minimum Defocus (nm) 700 Maximum Defocus (nm) 3300 Minimum Tilt Angle (degrees) Maximum Tilt Angle (degrees) Nominal CS 2 Imaging Mode BRIGHT FIELD Specimen Holder Model Nominal Magnification 50000 Calibrated Magnification 49300 Source FIELD EMISSION GUN Acceleration Voltage (kV) 200 Imaging Details
EM Software Task Software Package Version MODEL FITTING VEDA RECONSTRUCTION EM3DR 2 RECONSTRUCTION P3DR RECONSTRUCTION PFT 2 RECONSTRUCTION POR