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H5 (tyTy) Influenza Virus Haemagglutinin in Complex with Human Receptor Analogue 6'-SLN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 BIS-TRIS PROPANE PH 7.5, 0.05 - 0.15 M K/NAPO4 (PH 7.0), 15-18% PEG 3350
Crystal Properties Matthews coefficient Solvent content 3.11 60.46
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.346 α = 90 b = 228.296 β = 114.01 c = 71.267 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M 2012-03-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.36 56.55 97.1 0.09 7.9 3.1 81446 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.36 2.49 92.6 0.6 2 2.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.36 56.61 77352 4094 97 0.21371 0.21127 0.2134 0.25839 0.2566 RANDOM 61.609
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.25 -0.83 4.18 -2.55
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.368 r_dihedral_angle_4_deg 15.784 r_dihedral_angle_3_deg 14.266 r_dihedral_angle_1_deg 5.593 r_angle_refined_deg 1.154 r_mcangle_it 0.854 r_scbond_it 0.726 r_angle_other_deg 0.683 r_mcbond_it 0.503 r_mcbond_other 0.503
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.368 r_dihedral_angle_4_deg 15.784 r_dihedral_angle_3_deg 14.266 r_dihedral_angle_1_deg 5.593 r_angle_refined_deg 1.154 r_mcangle_it 0.854 r_scbond_it 0.726 r_angle_other_deg 0.683 r_mcbond_it 0.503 r_mcbond_other 0.503 r_chiral_restr 0.06 r_bond_refined_d 0.006 r_gen_planes_refined 0.004 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11019 Nucleic Acid Atoms Solvent Atoms 712 Heterogen Atoms 191
Software Software Software Name Purpose REFMAC refinement XDS data reduction SCALA data scaling PHASER phasing