☰ Navigation Tabs
FACTOR INHIBITING HIF-1 ALPHA IN COMPLEX WITH CONSENSUS ANKYRIN REPEAT DOMAIN-SER PEPTIDE (20-MER)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1H2K PDB ENTRY 1H2K
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 1.6 M AMMONIUM SULPHATE, 6% PEG 400, 0.1 M HEPES PH 7.5
Crystal Properties Matthews coefficient Solvent content 3.08 63
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 86.355 α = 90 b = 86.355 β = 90 c = 148.308 γ = 90
Symmetry Space Group P 41 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M MIRRORS 2011-12-03 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I03 Diamond I03
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.39 29.9 99.3 0.08 17 12 22918 2 45.4
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.39 2.45 91.7 0.53 2.2 9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1H2K 2.39 29.91 22918 1192 99.3 0.225 0.225 0.2325 0.241 0.2452 RANDOM 61.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.31 -3.31 6.62
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 24.1 c_scangle_it 4.3 c_scbond_it 4.03 c_mcangle_it 1.95 c_angle_deg 1.4 c_mcbond_it 1.17 c_improper_angle_d 1.05 c_bond_d 0.009 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 24.1 c_scangle_it 4.3 c_scbond_it 4.03 c_mcangle_it 1.95 c_angle_deg 1.4 c_mcbond_it 1.17 c_improper_angle_d 1.05 c_bond_d 0.009 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2836 Nucleic Acid Atoms Solvent Atoms 84 Heterogen Atoms 31
Software Software Software Name Purpose CNS refinement XDS data reduction SCALA data scaling PHASER phasing