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Humanised monomeric RadA in complex with 2-amino benzothiazole
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1PZN PDB ENTRY 1PZN CHAIN A
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.2 8% PEG-1000, 50 MM NAKPHOSPHATE, PH 6.2
Crystal Properties Matthews coefficient Solvent content 1.83 32.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 37.62 α = 90 b = 78.77 β = 118.06 c = 39.63 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2008-12-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I04 Diamond I04
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 39.62 99.3 0.05 16.5 3.7 29702 2 24.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.55 1.64 98.8 0.58 2.2 3.7
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1PZN CHAIN A 1.55 33.22 1.99 29696 1522 99.73 0.1886 0.1868 0.1934 0.2236 0.2274
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 1.4259 3.1165 0.4133 -1.8392
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 16.974 f_angle_d 1.566 f_chiral_restr 0.151 f_bond_d 0.006 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1714 Nucleic Acid Atoms Solvent Atoms 273 Heterogen Atoms 15
Software Software Software Name Purpose PHENIX refinement XDS data reduction XDS data scaling AMoRE phasing