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Crystal structure of the NF90-NF45 dimerisation domain complex
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other INITIAL MODEL GENERATED FROM A GOLD DERIVATIVE SOLVED IN SPACE GROUP C 2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 100 MM MES PH 6.0, 0.22 M SODIUM MALONATE, 18 % PEG 8000
Crystal Properties Matthews coefficient Solvent content 2.9 57
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.9 α = 90 b = 131.3 β = 90 c = 176 γ = 90
Symmetry Space Group I 2 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 PIXEL DECTRIS PILATUS 6M MIRRORS 2010-05-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X10SA SLS X10SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 79 98.4 0.08 15.3 6.4 74599 2 27
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.9 2 95.4 0.6 3.4
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT INITIAL MODEL GENERATED FROM A GOLD DERIVATIVE SOLVED IN SPACE GROUP C 2 1.902 88 1.99 74599 3763 98.74 0.1863 0.185 0.1823 0.21 0.2067 30.7
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -4.3242 8.2976 -3.9734
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.461 f_angle_d 1.035 f_chiral_restr 0.064 f_bond_d 0.007 f_plane_restr 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4985 Nucleic Acid Atoms Solvent Atoms 654 Heterogen Atoms 67
Software Software Software Name Purpose PHENIX refinement XDS data reduction XSCALE data scaling PHASER phasing