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Near-atomic resolution neutron crystallography on the oxidised form perdeuterated Pyrococcus furiosus rubredoxin.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 PH 6.5
Crystal Properties Matthews coefficient Solvent content 1.46 15.08
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 34.36 α = 90 b = 35.316 β = 90 c = 43.993 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 neutron 5ATM 3HE, CURVED 120X30 DEGREES INSTITUT LAUE LANGEVIN DETECTOR GROUP BORON CARBIDE BEAM DEFINING APERTURES
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 NUCLEAR REACTOR ILL BEAMLINE D19 ILL D19
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.05 18.67 93 0.08 0.095 10.1 3.1 10521 1.5 8.36
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) Mean Isotropic B NEUTRON DIFFRACTION NONE 1.05 15.705 1.33 22729 1159 88.73 0.201 0.199 0.2374
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.4276 0.1858 0.2418
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 13.321 f_angle_d 1.976 f_chiral_restr 0.122 f_bond_d 0.023 f_plane_restr 0.011
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 421 Nucleic Acid Atoms Solvent Atoms 149 Heterogen Atoms 5
Software Software Software Name Purpose PHENIX refinement RETREAT data reduction RETREAT data scaling