☰ Navigation Tabs
Crystal structure of phosphoserine phosphatase from T. onnurineus in complex with NDSB-201
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 1.45M SODIUM CITRATE, 0.2M NDSB-201, pH 6.5
Crystal Properties Matthews coefficient Solvent content 2.94 58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 128.131 α = 90 b = 128.131 β = 90 c = 63.077 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 294 2011-02-18 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A Photon Factory AR-NW12A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.78 28.65 94.2 0.07 21.4 4.7 91927 17.33
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.78 1.81 98.1 0.46 2.7 3.8
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION SAD NONE 1.783 28.651 91927 4592 94.16 0.1964 0.1951 0.1947 0.2206 0.2172 19.25
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -1.0086 -1.0086 2.0173
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.735 f_angle_d 1.059 f_chiral_restr 0.07 f_bond_d 0.007 f_plane_restr 0.004
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 6440 Nucleic Acid Atoms Solvent Atoms 866 Heterogen Atoms 78
Software Software Software Name Purpose PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling SOLVE phasing