☰ Navigation Tabs
V113I - Angiogenin mutants and amyotrophic lateral sclerosis - a biochemical and biological analysis
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1ANG PDB ENTRY 1ANG
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 20 % PEG 4K, 0.4 M NA/K TARTRATE, 0.1 M NA CITRATE PH 5.5
Crystal Properties Matthews coefficient Solvent content 3.3 62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 82.269 α = 90 b = 118.284 β = 90 c = 37.215 γ = 90
Symmetry Space Group C 2 2 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315 2008-05-17 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.96 50 92.1 0.05 29 7.5 13478 24.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.96 2.03 69 0.18 7.1 6.6
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1ANG 1.96 29.571 0.08 12013 1100 89.3 0.1982 0.1957 0.2015 0.2211 0.2003
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -5.053 19.6176 -14.5646
RMS Deviations Key Refinement Restraint Deviation f_dihedral_angle_d 14.708 f_angle_d 1.053 f_chiral_restr 0.073 f_bond_d 0.007 f_plane_restr 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 963 Nucleic Acid Atoms Solvent Atoms 99 Heterogen Atoms 10
Software Software Software Name Purpose PHENIX refinement HKL-2000 data reduction HKL-2000 data scaling PHASER phasing