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Crystal structure of the Rubella virus envelope glycoprotein E1 in post-fusion form (crystal form I)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 1-3% PEG 4K, 0.1M NAHEPES PH7.5-8, 30% GLYCEROL
Crystal Properties Matthews coefficient Solvent content 3.03 59
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 129.98 α = 90 b = 121.38 β = 90 c = 126.43 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 PIXEL DECTRIS PILATUS 6M DYNAMICALLY BENDABLE 2007-11-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SLS BEAMLINE X06SA SLS X06SA
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.78 45.3 98.3 0.09 16.7 8.6 188417 2 27.23
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.78 1.87 88.1 0.5 2 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SIRAS THROUGHOUT NONE 1.8 20 183967 18506 99.64 0.1682 0.1666 0.1691 0.1831 0.1865 RANDOM 30.15
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.6267 0.7929 -0.1662
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 15.15 t_omega_torsion 2.99 t_angle_deg 0.96 t_bond_d 0.007 t_dihedral_angle_d t_incorr_chiral_ct t_pseud_angle t_trig_c_planes t_gen_planes t_it
RMS Deviations Key Refinement Restraint Deviation t_other_torsion 15.15 t_omega_torsion 2.99 t_angle_deg 0.96 t_bond_d 0.007 t_dihedral_angle_d t_incorr_chiral_ct t_pseud_angle t_trig_c_planes t_gen_planes t_it t_nbd t_improper_torsion t_chiral_improper_torsion t_sum_occupancies t_utility_distance t_utility_angle t_utility_torsion t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 9572 Nucleic Acid Atoms Solvent Atoms 1547 Heterogen Atoms 317
Software Software Software Name Purpose BUSTER refinement XDS data reduction SCALA data scaling SHARP phasing