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N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-cyclopropyl-5-(3,5- dimethyl-1,2-oxazol-4-yl)-2-methylbenzene-1-sulfonamide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 293 0.1 M HEPES PH 7.0, 22-28% PEG 3350, 0.2 M (NH4)2SO4, 20 DEGREES CELSIUS.
Crystal Properties Matthews coefficient Solvent content 2.01 38.67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 113.967 α = 90 b = 55.725 β = 94.96 c = 68.126 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 315r 2009-02-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID23-1 ESRF ID23-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.86 67.88 97.7 0.05 22.2 3.6 35351
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.86 1.89 86 0.38 2.1 2.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.85 67.88 33945 1405 97.48 0.1747 0.17383 0.1885 0.19507 0.2135 RANDOM 39.975
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.23 -1.78 -1.6 -0.93
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.949 r_dihedral_angle_4_deg 22.174 r_dihedral_angle_3_deg 11.067 r_dihedral_angle_1_deg 4.103 r_scangle_it 2.403 r_scbond_it 1.457 r_mcangle_it 1.222 r_angle_refined_deg 0.904 r_angle_other_deg 0.768 r_mcbond_it 0.631
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 38.949 r_dihedral_angle_4_deg 22.174 r_dihedral_angle_3_deg 11.067 r_dihedral_angle_1_deg 4.103 r_scangle_it 2.403 r_scbond_it 1.457 r_mcangle_it 1.222 r_angle_refined_deg 0.904 r_angle_other_deg 0.768 r_mcbond_it 0.631 r_mcbond_other 0.091 r_chiral_restr 0.05 r_bond_refined_d 0.006 r_gen_planes_refined 0.003 r_bond_other_d 0.001 r_gen_planes_other 0.001 r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2774 Nucleic Acid Atoms Solvent Atoms 281 Heterogen Atoms 90
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling