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Crosstalk between Cu(I) and Zn(II) homeostasis
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2XMW PDB ENTRY 2XMW
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 200 MM NAF, 20% (W/V) PEG 3350
Crystal Properties Matthews coefficient Solvent content 1.8 32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 24.66 α = 90 b = 52.6 β = 98.13 c = 39.92 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2011-05-30 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON DIAMOND BEAMLINE I02 Diamond I02
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 31.59 91.4 0.05 15.3 4 18146 2 12.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.48 86.2 0.22 5.1 4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2XMW 1.4 39.52 17213 916 90.75 0.14263 0.13976 0.1404 0.19527 0.1945 RANDOM 14.371
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.25 0.38 0.8 -0.95
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.57 r_sphericity_free 24.893 r_dihedral_angle_4_deg 20.461 r_dihedral_angle_3_deg 12.401 r_sphericity_bonded 10.46 r_dihedral_angle_1_deg 5.624 r_rigid_bond_restr 2.421 r_angle_refined_deg 1.525 r_chiral_restr 0.091 r_bond_refined_d 0.011
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 41.57 r_sphericity_free 24.893 r_dihedral_angle_4_deg 20.461 r_dihedral_angle_3_deg 12.401 r_sphericity_bonded 10.46 r_dihedral_angle_1_deg 5.624 r_rigid_bond_restr 2.421 r_angle_refined_deg 1.525 r_chiral_restr 0.091 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_it r_mcbond_other r_mcangle_it r_mcangle_other r_scbond_it r_scbond_other r_scangle_it r_scangle_other r_long_range_B_refined r_long_range_B_other
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 998 Nucleic Acid Atoms Solvent Atoms 118 Heterogen Atoms 4
Software Software Software Name Purpose REFMAC refinement iMOSFLM data reduction SCALA data scaling MOLREP phasing