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CpGH89CBM32-5, from Clostridium perfringens, in complex with galactose
Crystallization Crystal Properties Matthews coefficient Solvent content 1.93 36.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.271 α = 90 b = 38.322 β = 90.64 c = 53.875 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 113 IMAGE PLATE RIGAKU-MSC R-AXIS IV++ M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU MICROMAX-002
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.55 20 99.6 0.06 13 3.1 21421 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT NONE 1.55 54.23 18460 992 99.54 0.18831 0.18644 0.1822 0.22406 0.2167 RANDOM 17.337
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.15 -0.66 0.09 0.05
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.034 r_dihedral_angle_4_deg 10.85 r_dihedral_angle_3_deg 10.439 r_dihedral_angle_1_deg 6.584 r_scangle_it 3.742 r_scbond_it 2.325 r_mcangle_it 1.473 r_angle_refined_deg 1.415 r_mcbond_it 0.856 r_chiral_restr 0.098
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 37.034 r_dihedral_angle_4_deg 10.85 r_dihedral_angle_3_deg 10.439 r_dihedral_angle_1_deg 6.584 r_scangle_it 3.742 r_scbond_it 2.325 r_mcangle_it 1.473 r_angle_refined_deg 1.415 r_mcbond_it 0.856 r_chiral_restr 0.098 r_bond_refined_d 0.013 r_gen_planes_refined 0.007 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_refined r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_refined r_symmetry_vdw_other r_symmetry_hbond_refined r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1058 Nucleic Acid Atoms Solvent Atoms 256 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement d*TREK data reduction d*TREK data scaling