X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP6.52771.6M Ammonium sulfate, 10% Dioxane, 0.1M MES pH 6.5, Deoxy-Big Chap, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
3.0759.99

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 166.406α = 90
b = 37.726β = 125.43
c = 101.631γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 210Rh coated Si vertical focus mirror2007-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCHESS BEAMLINE A10.987CHESSA1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.165098.90.1418.75.727427-1
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.162.2492.10.3654.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.1741.422987724457271097.690.19240.188370.22944RANDOM28.7193
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.71.01-1.333.21
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.638
r_dihedral_angle_4_deg16.451
r_dihedral_angle_3_deg13.951
r_dihedral_angle_1_deg5.249
r_scangle_it1.917
r_angle_refined_deg1.257
r_angle_other_deg1.187
r_scbond_it1.152
r_mcangle_it0.653
r_mcbond_it0.571
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.638
r_dihedral_angle_4_deg16.451
r_dihedral_angle_3_deg13.951
r_dihedral_angle_1_deg5.249
r_scangle_it1.917
r_angle_refined_deg1.257
r_angle_other_deg1.187
r_scbond_it1.152
r_mcangle_it0.653
r_mcbond_it0.571
r_nbd_other0.179
r_symmetry_hbond_refined0.179
r_nbd_refined0.176
r_nbtor_refined0.174
r_symmetry_vdw_other0.152
r_xyhbond_nbd_refined0.133
r_symmetry_vdw_refined0.123
r_nbtor_other0.08
r_bond_refined_d0.008
r_gen_planes_refined0.003
r_bond_other_d0.001
r_gen_planes_other0.001
r_chiral_restr
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2686
Nucleic Acid Atoms262
Solvent Atoms272
Heterogen Atoms116

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
HKL-2000data collection